STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB36796.1Hypothetical protein. (200 aa)    
Predicted Functional Partners:
EFB36797.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.668
EFB33888.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
 
 
 0.516
EFB35015.1
Toxin-antitoxin system, antitoxin component, Xre family; KEGG: bur:Bcep18194_B2815 0.0017 cyanase K01725.
  
 
 
 0.509
EFB36801.1
Hypothetical protein.
 
     0.490
EFB36374.1
Toxin-antitoxin system, antitoxin component, Xre family; KEGG: sdn:Sden_1081 0.0068 2-dehydropantoate 2-reductase K00077.
   
 
 0.448
EFB33978.1
DNA-binding helix-turn-helix protein.
   
 
 0.448
EFB33698.1
DNA-binding helix-turn-helix protein; Psort location: Cytoplasmic, score: 8.96.
   
 
 0.448
EFB36370.1
Hypothetical protein.
    
 
 0.444
EFB35699.1
DNA-binding helix-turn-helix protein; KEGG: mja:MJ1420 2.9e-05 glucosamine--fructose-6-phosphate aminotransferase (isomerizing) K00820; Psort location: Cytoplasmic, score: 8.96.
    
 
 0.444
EFB35812.1
DNA-binding helix-turn-helix protein.
    
 
 0.444
Your Current Organism:
Prevotella copri
NCBI taxonomy Id: 537011
Other names: P. copri DSM 18205, Prevotella copri CB7, Prevotella copri DSM 18205, Prevotella copri JCM 13464, Prevotella copri str. DSM 18205, Prevotella copri strain DSM 18205
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.