STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB36648.1Chain length determinant protein; KEGG: pgi:PG0436 5.2e-103 capsular polysaccharide transport protein, putative K00903; Psort location: CytoplasmicMembrane, score: 9.82. (847 aa)    
Predicted Functional Partners:
EFB36903.1
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; KEGG: csa:Csal_1693 6.7e-55 undecaprenyl-phosphate galactosephosphotransferase K00996; Psort location: CytoplasmicMembrane, score: 9.82.
 
 
 0.999
EFB35804.1
Polysaccharide biosynthesis/export protein.
 
 0.998
EFB36382.1
Polysaccharide biosynthesis/export protein.
  
 0.996
EFB36827.1
Respiratory-chain NADH dehydrogenase, 49 Kd subunit; KEGG: bth:BT4065 2.0e-149 NADH dehydrogenase I, chain D K00332:K00333; Psort location: Cytoplasmic, score: 8.96.
     
 0.953
EFB34512.1
Bacterial sugar transferase; KEGG: rso:RS02342 3.2e-55 RSp1008; probable glycosyl transferase transmembrane protein; Psort location: CytoplasmicMembrane, score: 9.82.
 
 
 0.942
EFB36395.1
KEGG: syg:sync_0147 2.8e-40 possible sugar transferase K01009; Psort location: CytoplasmicMembrane, score: 9.82.
 
 
 0.933
EFB36905.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.46.
  
 
 0.882
EFB36907.1
KEGG: gka:GK3304 5.3e-126 mannose-6-phosphate isomerase (phosphomannose isomerase); mannose-1-phosphate guanylyl transferase (GDP-mannose pyrophosphorylase) K00971:K01809.
  
 
 0.879
EFB34527.1
Polysaccharide biosynthesis protein; KEGG: ftu:FTT1464c 5.6e-33 wbtA; dTDP-glucose 4,6-dehydratase K01710; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.845
EFB34528.1
Polysaccharide biosynthesis protein; KEGG: saa:SAUSA300_0156 4.1e-110 cap5E; capsular polysaccharide biosynthesis protein Cap5E K01726; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.845
Your Current Organism:
Prevotella copri
NCBI taxonomy Id: 537011
Other names: P. copri DSM 18205, Prevotella copri CB7, Prevotella copri DSM 18205, Prevotella copri JCM 13464, Prevotella copri str. DSM 18205, Prevotella copri strain DSM 18205
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