STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB36657.1Mannitol dehydrogenase domain protein; KEGG: bth:BT0825 4.2e-188 altronate oxidoreductase K00041; Psort location: Cytoplasmic, score: 8.96. (493 aa)    
Predicted Functional Partners:
EFB36488.1
SAF domain protein; KEGG: bth:BT0486 2.4e-194 altronate hydrolase K01685.
 
 0.988
uxaC
Glucuronate isomerase; KEGG: bth:BT0823 7.3e-200 uronate isomerase K01812.
 
 
 0.975
uxuA
Putative mannonate dehydratase; Catalyzes the dehydration of D-mannonate.
 
 
 0.795
EFB36656.1
Hypothetical protein.
       0.773
EFB36907.1
KEGG: gka:GK3304 5.3e-126 mannose-6-phosphate isomerase (phosphomannose isomerase); mannose-1-phosphate guanylyl transferase (GDP-mannose pyrophosphorylase) K00971:K01809.
    
 0.624
kduI
4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase; Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate. Belongs to the KduI family.
 
   
 0.547
EFB36937.1
Glycosyl hydrolase, family 88; KEGG: tma:TM0437 3.0e-75 exo-poly-alpha-D-galacturonosidase, putative K01238; Psort location: Extracellular, score: 9.71; Belongs to the glycosyl hydrolase 28 family.
 
    0.545
EFB36655.1
Hypothetical protein; KEGG: mxa:MXAN_3839 6.6e-13 rluB; ribosomal large subunit pseudouridine synthase B K06178.
       0.514
EFB35251.1
Oxidoreductase, short chain dehydrogenase/reductase family protein; KEGG: bth:BT3232 2.8e-111 gluconate 5-dehydrogenase K00046; Psort location: Cytoplasmic, score: 9.26.
  
  
 0.492
EFB36153.1
Putative o-succinylbenzoate synthase; KEGG: chu:CHU_2415 1.1e-63 clcB; chloromuconate cycloisomerase K01860; Psort location: Cytoplasmic, score: 8.96.
    
 0.459
Your Current Organism:
Prevotella copri
NCBI taxonomy Id: 537011
Other names: P. copri DSM 18205, Prevotella copri CB7, Prevotella copri DSM 18205, Prevotella copri JCM 13464, Prevotella copri str. DSM 18205, Prevotella copri strain DSM 18205
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.