STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB36736.1DNA-binding helix-turn-helix protein; Psort location: Cytoplasmic, score: 8.96. (76 aa)    
Predicted Functional Partners:
EFB36735.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.723
EFB36733.1
Eco57I restriction endonuclease; KEGG: spr:spr1101 9.9e-63 spnII-interrupted-C; uncharacterized restriction enzyme, interrupted-C K01155.
 
     0.700
guaA
GMP synthase (glutamine-hydrolyzing) domain protein; Catalyzes the synthesis of GMP from XMP.
    
  0.684
EFB36734.1
Hypothetical protein; KEGG: spr:spr1102 1.9e-33 spnII-interrupted-N; uncharacterized restriction enzyme, interrupted-N K01155.
       0.660
EFB33970.1
Hypothetical protein.
  
     0.407
EFB36737.1
Hypothetical protein.
       0.400
Your Current Organism:
Prevotella copri
NCBI taxonomy Id: 537011
Other names: P. copri DSM 18205, Prevotella copri CB7, Prevotella copri DSM 18205, Prevotella copri JCM 13464, Prevotella copri str. DSM 18205, Prevotella copri strain DSM 18205
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.