STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB36756.1Single-strand binding family protein. (125 aa)    
Predicted Functional Partners:
EFB36708.1
Hypothetical protein; KEGG: bth:BT2230 1.6e-09 DNA polymerase III alpha subunit K02337.
  
 0.833
EFB35560.1
Hypothetical protein; Psort location: OuterMembrane, score: 9.49.
  
     0.767
EFB35690.1
Hypothetical protein.
  
     0.747
EFB34697.1
Hypothetical protein.
  
     0.720
EFB33870.1
Phosphate-selective porin O and P.
  
     0.704
EFB33927.1
DNA-binding helix-turn-helix protein; KEGG: eba:ebA5278 0.00033 bzdR; regulator of the anaerobic catobolism of benzoate BzdR K00891.
  
     0.697
EFB35477.1
KEGG: bfr:BF0712 0. DNA polymerase III alpha subunit K02337; Psort location: Cytoplasmic, score: 9.97.
    
 0.684
EFB34132.1
Zinc-dependent metalloproteinase lipoprotein, BF0631 family.
  
     0.671
priA
Primosomal protein N; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily.
    
 
 0.670
dnaX
DNA polymerase III, subunit gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.
    
 
 0.630
Your Current Organism:
Prevotella copri
NCBI taxonomy Id: 537011
Other names: P. copri DSM 18205, Prevotella copri CB7, Prevotella copri DSM 18205, Prevotella copri JCM 13464, Prevotella copri str. DSM 18205, Prevotella copri strain DSM 18205
Server load: medium (48%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.