Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EFB36597.1 | EFB36598.1 | PREVCOP_03976 | PREVCOP_03977 | Putative flagellar protein FliS. | Hypothetical protein. | 0.810 |
EFB36597.1 | EFB36599.1 | PREVCOP_03976 | PREVCOP_03978 | Putative flagellar protein FliS. | Hypothetical protein. | 0.810 |
EFB36597.1 | EFB36601.1 | PREVCOP_03976 | PREVCOP_03980 | Putative flagellar protein FliS. | HD domain protein; Psort location: Cytoplasmic, score: 8.96. | 0.667 |
EFB36597.1 | menA | PREVCOP_03976 | PREVCOP_03979 | Putative flagellar protein FliS. | 1,4-dihydroxy-2-naphthoate octaprenyltransferase; Conversion of 1,4-dihydroxy-2-naphthoate (DHNA) to demethylmenaquinone (DMK); Belongs to the MenA family. Type 1 subfamily. | 0.697 |
EFB36597.1 | trxB | PREVCOP_03976 | PREVCOP_03974 | Putative flagellar protein FliS. | KEGG: pgi:PG1134 1.9e-112 trxB; thioredoxin reductase K00384; Psort location: Cytoplasmic, score: 9.97. | 0.427 |
EFB36598.1 | EFB36597.1 | PREVCOP_03977 | PREVCOP_03976 | Hypothetical protein. | Putative flagellar protein FliS. | 0.810 |
EFB36598.1 | EFB36599.1 | PREVCOP_03977 | PREVCOP_03978 | Hypothetical protein. | Hypothetical protein. | 0.824 |
EFB36598.1 | EFB36601.1 | PREVCOP_03977 | PREVCOP_03980 | Hypothetical protein. | HD domain protein; Psort location: Cytoplasmic, score: 8.96. | 0.676 |
EFB36598.1 | menA | PREVCOP_03977 | PREVCOP_03979 | Hypothetical protein. | 1,4-dihydroxy-2-naphthoate octaprenyltransferase; Conversion of 1,4-dihydroxy-2-naphthoate (DHNA) to demethylmenaquinone (DMK); Belongs to the MenA family. Type 1 subfamily. | 0.708 |
EFB36598.1 | trxB | PREVCOP_03977 | PREVCOP_03974 | Hypothetical protein. | KEGG: pgi:PG1134 1.9e-112 trxB; thioredoxin reductase K00384; Psort location: Cytoplasmic, score: 9.97. | 0.411 |
EFB36599.1 | EFB36597.1 | PREVCOP_03978 | PREVCOP_03976 | Hypothetical protein. | Putative flagellar protein FliS. | 0.810 |
EFB36599.1 | EFB36598.1 | PREVCOP_03978 | PREVCOP_03977 | Hypothetical protein. | Hypothetical protein. | 0.824 |
EFB36599.1 | EFB36601.1 | PREVCOP_03978 | PREVCOP_03980 | Hypothetical protein. | HD domain protein; Psort location: Cytoplasmic, score: 8.96. | 0.777 |
EFB36599.1 | menA | PREVCOP_03978 | PREVCOP_03979 | Hypothetical protein. | 1,4-dihydroxy-2-naphthoate octaprenyltransferase; Conversion of 1,4-dihydroxy-2-naphthoate (DHNA) to demethylmenaquinone (DMK); Belongs to the MenA family. Type 1 subfamily. | 0.708 |
EFB36599.1 | trxB | PREVCOP_03978 | PREVCOP_03974 | Hypothetical protein. | KEGG: pgi:PG1134 1.9e-112 trxB; thioredoxin reductase K00384; Psort location: Cytoplasmic, score: 9.97. | 0.411 |
EFB36601.1 | EFB36597.1 | PREVCOP_03980 | PREVCOP_03976 | HD domain protein; Psort location: Cytoplasmic, score: 8.96. | Putative flagellar protein FliS. | 0.667 |
EFB36601.1 | EFB36598.1 | PREVCOP_03980 | PREVCOP_03977 | HD domain protein; Psort location: Cytoplasmic, score: 8.96. | Hypothetical protein. | 0.676 |
EFB36601.1 | EFB36599.1 | PREVCOP_03980 | PREVCOP_03978 | HD domain protein; Psort location: Cytoplasmic, score: 8.96. | Hypothetical protein. | 0.777 |
EFB36601.1 | menA | PREVCOP_03980 | PREVCOP_03979 | HD domain protein; Psort location: Cytoplasmic, score: 8.96. | 1,4-dihydroxy-2-naphthoate octaprenyltransferase; Conversion of 1,4-dihydroxy-2-naphthoate (DHNA) to demethylmenaquinone (DMK); Belongs to the MenA family. Type 1 subfamily. | 0.788 |
menA | EFB36597.1 | PREVCOP_03979 | PREVCOP_03976 | 1,4-dihydroxy-2-naphthoate octaprenyltransferase; Conversion of 1,4-dihydroxy-2-naphthoate (DHNA) to demethylmenaquinone (DMK); Belongs to the MenA family. Type 1 subfamily. | Putative flagellar protein FliS. | 0.697 |
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