STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB36344.1Transporter, SSS family; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (478 aa)    
Predicted Functional Partners:
EFB36343.1
Peptidase family M13; KEGG: bfr:BF4102 3.7e-180 putative endothelin-converting enzyme K07386; Psort location: Cytoplasmic, score: 9.26.
       0.773
EFB36350.1
Carbon starvation protein CstA; Psort location: CytoplasmicMembrane, score: 10.00.
  
    0.677
EFB35160.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: reh:H16_A0828 4.8e-41 cycS1; signal transduction histidine kinase containing a receiver domain (hybrid) and a PAS sensor domain; Psort location: CytoplasmicMembrane, score: 7.88.
     
 0.661
EFB36492.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: dvu:DVU2587 1.2e-13 sensor histidine kinase; Psort location: CytoplasmicMembrane, score: 9.46.
  
 
 0.617
EFB34476.1
KEGG: sma:SAV6546 2.7e-23 putative ABC transporter permease K02028; Psort location: CytoplasmicMembrane, score: 9.92.
  
 
 0.558
EFB34475.1
KEGG: stc:str1502 3.9e-82 gnlQ; glutamine ABC transporter ATP-binding protein K02028; Psort location: CytoplasmicMembrane, score: 7.88.
  
  
 0.520
EFB35552.1
AMP-binding enzyme; KEGG: bfr:BF0528 6.7e-213 acetyl-coenzyme A synthetase K01895; Psort location: Cytoplasmic, score: 9.26.
  
  
 0.518
EFB36850.1
Hypothetical protein; KEGG: gox:GOX1475 0.00049 putative N-acetylglucosamine kinase K00884; Psort location: Cytoplasmic, score: 8.96.
 
     0.501
EFB35451.1
TonB-dependent receptor plug domain protein; Psort location: OuterMembrane, score: 9.49.
  
     0.478
EFB35773.1
KEGG: bfs:BF3541 3.9e-178 putative citrate synthase K01647; Psort location: Cytoplasmic, score: 9.97.
   
  
 0.471
Your Current Organism:
Prevotella copri
NCBI taxonomy Id: 537011
Other names: P. copri DSM 18205, Prevotella copri CB7, Prevotella copri DSM 18205, Prevotella copri JCM 13464, Prevotella copri str. DSM 18205, Prevotella copri strain DSM 18205
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.