STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB36346.1KEGG: chu:CHU_1044 8.8e-69 b-glycosyltransferase, glycosyltransferase family 2 protein K00754. (370 aa)    
Predicted Functional Partners:
EFB36347.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.46.
       0.760
recR
Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.
       0.745
EFB36349.1
Hypothetical protein.
       0.745
EFB36903.1
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; KEGG: csa:Csal_1693 6.7e-55 undecaprenyl-phosphate galactosephosphotransferase K00996; Psort location: CytoplasmicMembrane, score: 9.82.
 
 
 0.737
EFB36345.1
Acetyltransferase, GNAT family; KEGG: bth:BT1079 3.2e-32 acetyltransferase K00657; Psort location: Cytoplasmic, score: 8.96.
       0.706
EFB36350.1
Carbon starvation protein CstA; Psort location: CytoplasmicMembrane, score: 10.00.
  
    0.665
EFB35167.1
Hypothetical protein.
  
    0.597
EFB34954.1
Two component regulator propeller.
  
     0.586
EFB35418.1
Hypothetical protein.
  
     0.568
EFB36648.1
Chain length determinant protein; KEGG: pgi:PG0436 5.2e-103 capsular polysaccharide transport protein, putative K00903; Psort location: CytoplasmicMembrane, score: 9.82.
 
  
 0.529
Your Current Organism:
Prevotella copri
NCBI taxonomy Id: 537011
Other names: P. copri DSM 18205, Prevotella copri CB7, Prevotella copri DSM 18205, Prevotella copri JCM 13464, Prevotella copri str. DSM 18205, Prevotella copri strain DSM 18205
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.