STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
galKGalactokinase; KEGG: bfs:BF1661 4.1e-151 galK; putative galactokinase K00849; Psort location: Cytoplasmic, score: 8.96; Belongs to the GHMP kinase family. GalK subfamily. (386 aa)    
Predicted Functional Partners:
EFB36358.1
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
 0.994
EFB36361.1
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
 0.994
galE
KEGG: bth:BT0623 9.6e-127 putative UDP-glucose 4-epimerase K01784; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
 
 0.982
EFB36033.1
Aldose 1-epimerase; KEGG: ldb:Ldb1268 2.5e-48 putative mutarotase K01785.
  
 0.868
EFB36468.1
Oxidoreductase, NAD-binding domain protein; KEGG: rba:RB12038 2.9e-22 hypothetical protein; Psort location: Periplasmic, score: 9.44.
 
 0.841
EFB36359.1
Transporter, major facilitator family protein; KEGG: fnu:FN1441 0.0073 PTS system, fructose-specific IIABC component K02768:K02769:K02770; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.664
EFB35185.1
KEGG: bth:BT3340 0. beta-galactosidase K01190.
 
  
 0.661
EFB35559.1
Alpha-galactosidase; KEGG: bfr:BF0287 1.3e-271 alpha-galactosidase K07407.
 
  
 0.549
EFB35607.1
Glycosyl hydrolase family 2, sugar binding domain protein; KEGG: xcv:XCV4356 7.6e-134 bga2; beta-galactosidase K01190; Belongs to the glycosyl hydrolase 2 family.
 
  
 0.494
EFB36354.1
KEGG: pen:PSEEN3176 1.1e-125 ABC transporte, ATP binding protein; Psort location: CytoplasmicMembrane, score: 7.88.
   
  0.481
Your Current Organism:
Prevotella copri
NCBI taxonomy Id: 537011
Other names: P. copri DSM 18205, Prevotella copri CB7, Prevotella copri DSM 18205, Prevotella copri JCM 13464, Prevotella copri str. DSM 18205, Prevotella copri strain DSM 18205
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.