STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB36374.1Toxin-antitoxin system, antitoxin component, Xre family; KEGG: sdn:Sden_1081 0.0068 2-dehydropantoate 2-reductase K00077. (69 aa)    
Predicted Functional Partners:
dcm
KEGG: rpc:RPC_4309 1.7e-49 DNA-cytosine methyltransferase K00558; Psort location: Cytoplasmic, score: 8.96.
       0.606
EFB36371.1
Hypothetical protein; KEGG: hpa:HPAG1_0653 3.2e-09 hypothetical protein K00571.
       0.605
dcm-2
DNA (cytosine-5-)-methyltransferase; KEGG: eci:UTI89_C4938 1.5e-43 hypothetical protein K00558; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.
       0.605
EFB34202.1
Competence/damage-inducible domain protein CinA; Psort location: Cytoplasmic, score: 8.96; Belongs to the CinA family.
    
 0.560
EFB36370.1
Hypothetical protein.
       0.546
EFB36796.1
Hypothetical protein.
   
 
 0.448
EFB36157.1
Hypothetical protein.
  
     0.429
nifJ
Pyruvate synthase; KEGG: bfs:BF3168 0. nifJ; putative pyruvate-flavodoxin oxidoreductase K03737; Psort location: Cytoplasmic, score: 8.96.
    
  0.416
Your Current Organism:
Prevotella copri
NCBI taxonomy Id: 537011
Other names: P. copri DSM 18205, Prevotella copri CB7, Prevotella copri DSM 18205, Prevotella copri JCM 13464, Prevotella copri str. DSM 18205, Prevotella copri strain DSM 18205
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.