STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB36390.1Hypothetical protein; KEGG: ctc:CTC01739 7.0e-05 phosphoserine phosphatase K01079. (222 aa)    
Predicted Functional Partners:
hisE
phosphoribosyl-ATP diphosphatase; KEGG: bth:BT1377 9.6e-79 phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase K01496:K01523; Psort location: Cytoplasmic, score: 9.26; In the N-terminal section; belongs to the PRA-CH family.
  
  
 0.952
EFB36391.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.781
EFB36388.1
Hypothetical protein; KEGG: lsl:LSL_0987 9.7e-13 rfaG; glycosyltransferase K00754.
       0.773
EFB36389.1
Hypothetical protein; KEGG: sfl:SF2099 3.6e-24 rfbF; DTDP-rhamnosyl transferase RfbF.
       0.773
EFB36392.1
Glycosyltransferase, group 2 family protein; KEGG: hit:NTHI2002 6.8e-46 lsgF; putative UDP-galactose--lipooligosaccharide galactosyltransferase; Psort location: Cytoplasmic, score: 8.96.
  
    0.758
EFB34481.1
KEGG: bth:BT2403 1.8e-299 homoserine dehydrogenase.
  
 
 0.752
ilvA
KEGG: tma:TM0356 4.4e-106 threonine dehydratase catabolic K01754; Psort location: Cytoplasmic, score: 8.96.
     
 0.697
EFB36387.1
Chain length determinant protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.645
hisB
Histidinol-phosphatase; KEGG: bth:BT0203 1.3e-145 hisB; histidinol-phosphatase / imidazoleglycerol-phosphate dehydratase K01089:K01693; In the C-terminal section; belongs to the imidazoleglycerol-phosphate dehydratase family.
  
  
 0.628
EFB36114.1
Vitamin B12 dependent methionine synthase, activation domain protein; KEGG: mca:MCA1545 3.8e-49 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase K00548; Psort location: Cytoplasmic, score: 8.96.
    
 0.589
Your Current Organism:
Prevotella copri
NCBI taxonomy Id: 537011
Other names: P. copri DSM 18205, Prevotella copri CB7, Prevotella copri DSM 18205, Prevotella copri JCM 13464, Prevotella copri str. DSM 18205, Prevotella copri strain DSM 18205
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