STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB36392.1Glycosyltransferase, group 2 family protein; KEGG: hit:NTHI2002 6.8e-46 lsgF; putative UDP-galactose--lipooligosaccharide galactosyltransferase; Psort location: Cytoplasmic, score: 8.96. (270 aa)    
Predicted Functional Partners:
EFB36389.1
Hypothetical protein; KEGG: sfl:SF2099 3.6e-24 rfbF; DTDP-rhamnosyl transferase RfbF.
    
  0.811
EFB36388.1
Hypothetical protein; KEGG: lsl:LSL_0987 9.7e-13 rfaG; glycosyltransferase K00754.
    
  0.789
EFB36390.1
Hypothetical protein; KEGG: ctc:CTC01739 7.0e-05 phosphoserine phosphatase K01079.
  
    0.758
EFB36391.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.757
EFB35151.1
Glycosyltransferase, group 2 family protein; KEGG: bce:BC5429 4.8e-29 beta-1,3-N-acetylglucosaminyltransferase K00754; Psort location: Cytoplasmic, score: 8.96.
  
 
  0.731
EFB34960.1
Glycosyltransferase, group 2 family protein; KEGG: fth:FTH_1386 2.2e-26 glycosyltransferase K00754.
 
  
  0.695
EFB36387.1
Chain length determinant protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
    0.668
EFB34961.1
Glycosyltransferase, group 2 family protein; KEGG: bce:BC5267 1.0e-19 glycosyltransferase K00754.
 
 
  0.635
EFB35369.1
KEGG: ava:Ava_1295 1.0e-28 polysaccharide deacetylase K01452; Psort location: Cytoplasmic, score: 9.26.
  
 
 0.622
EFB35162.1
Glycosyltransferase, group 2 family protein; KEGG: mma:MM0653 2.5e-23 glycosyltransferase involved in cell wall biogenesis.
  
  
  0.611
Your Current Organism:
Prevotella copri
NCBI taxonomy Id: 537011
Other names: P. copri DSM 18205, Prevotella copri CB7, Prevotella copri DSM 18205, Prevotella copri JCM 13464, Prevotella copri str. DSM 18205, Prevotella copri strain DSM 18205
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.