STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB36410.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.96. (303 aa)    
Predicted Functional Partners:
EFB36409.1
Hypothetical protein.
       0.824
dnaB
Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily.
       0.774
EFB36411.1
PUA domain protein; KEGG: chu:CHU_3712 1.6e-92 hypothetical protein K00599; Psort location: Cytoplasmic, score: 8.96.
       0.714
EFB36492.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: dvu:DVU2587 1.2e-13 sensor histidine kinase; Psort location: CytoplasmicMembrane, score: 9.46.
 
  
 0.626
EFB36469.1
Hypothetical protein; Psort location: OuterMembrane, score: 9.49.
  
     0.565
EFB36412.1
3'-5' exonuclease; KEGG: lic:LIC13263 4.7e-05 rnD; ribonuclease D K03684; Psort location: Cytoplasmic, score: 8.96.
       0.564
EFB34476.1
KEGG: sma:SAV6546 2.7e-23 putative ABC transporter permease K02028; Psort location: CytoplasmicMembrane, score: 9.92.
  
 
 0.563
EFB35282.1
PAP2 family protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.555
EFB36249.1
Phosphate-selective porin O and P.
 
     0.534
EFB35094.1
Phosphate-selective porin O and P.
 
     0.502
Your Current Organism:
Prevotella copri
NCBI taxonomy Id: 537011
Other names: P. copri DSM 18205, Prevotella copri CB7, Prevotella copri DSM 18205, Prevotella copri JCM 13464, Prevotella copri str. DSM 18205, Prevotella copri strain DSM 18205
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.