STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB36272.1Metallo-beta-lactamase domain protein; KEGG: gbe:GbCGDNIH1_1079 1.7e-24 metal-dependent hydrolase; Psort location: Cytoplasmic, score: 8.96. (221 aa)    
Predicted Functional Partners:
ribF
KEGG: bfs:BF4147 1.2e-78 ribF; putative riboflavin biosynthesis protein RibF K00861:K00953; Psort location: Cytoplasmic, score: 8.96.
      0.624
murB
UDP-N-acetylmuramate dehydrogenase; Cell wall formation.
       0.623
EFB36274.1
Hypothetical protein.
       0.585
pheS
phenylalanine--tRNA ligase, alpha subunit; KEGG: bth:BT1669 8.9e-140 phenylalanyl-tRNA synthetase alpha chain K01889; Psort location: Cytoplasmic, score: 9.97; Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily.
       0.515
EFB35245.1
Hypothetical protein; KEGG: bfs:BF0894 5.1e-112 putative enoyl-[acyl-carrier-protein] reductase [NADH] K00208.
  
  
  0.433
Your Current Organism:
Prevotella copri
NCBI taxonomy Id: 537011
Other names: P. copri DSM 18205, Prevotella copri CB7, Prevotella copri DSM 18205, Prevotella copri JCM 13464, Prevotella copri str. DSM 18205, Prevotella copri strain DSM 18205
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.