STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB36281.1Hypothetical protein. (49 aa)    
Predicted Functional Partners:
EFB36282.1
Biotin-requiring enzyme; KEGG: bth:BT1688 1.1e-31 bccP; biotin carboxyl carrier protein (BCCP) K01606.
       0.813
EFB36280.1
Carboxyl transferase domain protein; KEGG: bfr:BF3289 3.6e-214 propionyl-CoA carboxylase beta chain K01966; Psort location: Cytoplasmic, score: 8.96.
       0.771
EFB36279.1
TonB-dependent receptor; Psort location: OuterMembrane, score: 9.49.
       0.470
EFB36283.1
ThiF family protein; KEGG: hpa:HPAG1_0799 1.2e-66 thiamine biosynthesis protein; Psort location: Cytoplasmic, score: 8.96.
       0.443
Your Current Organism:
Prevotella copri
NCBI taxonomy Id: 537011
Other names: P. copri DSM 18205, Prevotella copri CB7, Prevotella copri DSM 18205, Prevotella copri JCM 13464, Prevotella copri str. DSM 18205, Prevotella copri strain DSM 18205
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.