STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB36298.1Divergent AAA domain protein; KEGG: mma:MM0198 3.6e-17 ATP-dependent DNA helicase K01529. (507 aa)    
Predicted Functional Partners:
EFB35988.1
Hypothetical protein.
  
  
  0.821
EFB34699.1
Divergent AAA domain protein; KEGG: fnu:FN0191 2.5e-23 ATP-dependent DNA helicase RecG K01529; Psort location: Cytoplasmic, score: 8.96.
  
  
  0.797
EFB35932.1
Divergent AAA domain protein; KEGG: mma:MM1668 1.2e-17 recG; ATP-dependent DNA helicase RecG K01529.
  
  
  0.766
EFB34345.1
Hypothetical protein; KEGG: fnu:FN0191 4.7e-14 ATP-dependent DNA helicase RecG K01529; Psort location: Cytoplasmic, score: 8.96.
  
     0.758
EFB34344.1
Divergent AAA domain protein; KEGG: cgl:NCgl0024 2.4e-06 cgl0025; predicted transcriptional regulator K01529; Psort location: Cytoplasmic, score: 8.96.
  
  
  0.690
EFB34290.1
KEGG: aci:ACIAD3431 4.0e-24 putative type I restriction-modification system specificity determinant for hsdM and hsdR (HsdS) K01154.
  
    0.505
EFB36780.1
Divergent AAA domain protein; KEGG: cgl:NCgl0024 6.6e-21 cgl0025; predicted transcriptional regulator K01529; Psort location: Cytoplasmic, score: 8.96.
  
  
 
0.441
Your Current Organism:
Prevotella copri
NCBI taxonomy Id: 537011
Other names: P. copri DSM 18205, Prevotella copri CB7, Prevotella copri DSM 18205, Prevotella copri JCM 13464, Prevotella copri str. DSM 18205, Prevotella copri strain DSM 18205
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.