STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB36305.1Hypothetical protein. (497 aa)    
Predicted Functional Partners:
EFB35270.1
Hypothetical protein; Psort location: OuterMembrane, score: 9.49.
  
    0.788
EFB36599.1
Hypothetical protein.
  
     0.774
EFB36176.1
Hypothetical protein.
  
     0.774
EFB35634.1
Hypothetical protein.
  
     0.772
EFB36420.1
Hypothetical protein.
  
     0.770
EFB34182.1
Tetratricopeptide repeat protein.
  
     0.765
EFB36112.1
Hypothetical protein.
  
     0.764
EFB36268.1
Sporulation and cell division repeat protein; KEGG: pfo:Pfl_1900 2.7e-05 argininosuccinate synthase K03749.
  
     0.763
EFB36251.1
Hypothetical protein.
  
     0.760
EFB35642.1
Hypothetical protein.
  
     0.760
Your Current Organism:
Prevotella copri
NCBI taxonomy Id: 537011
Other names: P. copri DSM 18205, Prevotella copri CB7, Prevotella copri DSM 18205, Prevotella copri JCM 13464, Prevotella copri str. DSM 18205, Prevotella copri strain DSM 18205
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.