STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mtgAMonofunctional biosynthetic peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family. (244 aa)    
Predicted Functional Partners:
EFB36311.1
OmpA family protein; KEGG: bxe:Bxe_A4171 1.9e-07 putative cytochrome c oxidase K00403; Psort location: OuterMembrane, score: 9.92.
 
     0.840
mrdA
Penicillin-binding protein 2; KEGG: cph:Cpha266_0817 7.6e-79 peptidoglycan glycosyltransferase K05364; Psort location: CytoplasmicMembrane, score: 8.02.
  
 
 0.714
EFB36209.1
Transglycosylase; KEGG: bfs:BF2276 2.7e-257 putative penicillin-binding peptidoglycan biosynthesis-related exported protein K05366.
 
 
0.684
EFB36309.1
UvrD/REP helicase; KEGG: bfs:BF2555 4.4e-225 putative helicase K03657.
       0.683
EFB35643.1
Penicillin-binding protein, transpeptidase domain protein; KEGG: bfr:BF0311 3.6e-191 penicillin-binding protein K03587; Psort location: CytoplasmicMembrane, score: 8.02.
  
 
 0.643
EFB36817.1
Hypothetical protein.
    
 
 0.614
EFB36268.1
Sporulation and cell division repeat protein; KEGG: pfo:Pfl_1900 2.7e-05 argininosuccinate synthase K03749.
    
 
 0.614
EFB35130.1
Peptidase, M23 family; KEGG: hit:NTHI0532 8.2e-20 conserved hypothetical metalloprotease; Psort location: Cytoplasmic, score: 8.96.
 
  
 0.575
proS
proline--tRNA ligase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro).
       0.574
EFB36962.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
    
 0.568
Your Current Organism:
Prevotella copri
NCBI taxonomy Id: 537011
Other names: P. copri DSM 18205, Prevotella copri CB7, Prevotella copri DSM 18205, Prevotella copri JCM 13464, Prevotella copri str. DSM 18205, Prevotella copri strain DSM 18205
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.