Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EFB36311.1 | EFB36312.1 | PREVCOP_04200 | PREVCOP_04201 | OmpA family protein; KEGG: bxe:Bxe_A4171 1.9e-07 putative cytochrome c oxidase K00403; Psort location: OuterMembrane, score: 9.92. | Hypothetical protein. | 0.572 |
EFB36311.1 | mtgA | PREVCOP_04200 | PREVCOP_04199 | OmpA family protein; KEGG: bxe:Bxe_A4171 1.9e-07 putative cytochrome c oxidase K00403; Psort location: OuterMembrane, score: 9.92. | Monofunctional biosynthetic peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family. | 0.840 |
EFB36311.1 | proS | PREVCOP_04200 | PREVCOP_04202 | OmpA family protein; KEGG: bxe:Bxe_A4171 1.9e-07 putative cytochrome c oxidase K00403; Psort location: OuterMembrane, score: 9.92. | proline--tRNA ligase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro). | 0.614 |
EFB36312.1 | EFB36311.1 | PREVCOP_04201 | PREVCOP_04200 | Hypothetical protein. | OmpA family protein; KEGG: bxe:Bxe_A4171 1.9e-07 putative cytochrome c oxidase K00403; Psort location: OuterMembrane, score: 9.92. | 0.572 |
EFB36312.1 | mtgA | PREVCOP_04201 | PREVCOP_04199 | Hypothetical protein. | Monofunctional biosynthetic peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family. | 0.493 |
EFB36312.1 | proS | PREVCOP_04201 | PREVCOP_04202 | Hypothetical protein. | proline--tRNA ligase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro). | 0.613 |
mtgA | EFB36311.1 | PREVCOP_04199 | PREVCOP_04200 | Monofunctional biosynthetic peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family. | OmpA family protein; KEGG: bxe:Bxe_A4171 1.9e-07 putative cytochrome c oxidase K00403; Psort location: OuterMembrane, score: 9.92. | 0.840 |
mtgA | EFB36312.1 | PREVCOP_04199 | PREVCOP_04201 | Monofunctional biosynthetic peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family. | Hypothetical protein. | 0.493 |
mtgA | proS | PREVCOP_04199 | PREVCOP_04202 | Monofunctional biosynthetic peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family. | proline--tRNA ligase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro). | 0.574 |
proS | EFB36311.1 | PREVCOP_04202 | PREVCOP_04200 | proline--tRNA ligase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro). | OmpA family protein; KEGG: bxe:Bxe_A4171 1.9e-07 putative cytochrome c oxidase K00403; Psort location: OuterMembrane, score: 9.92. | 0.614 |
proS | EFB36312.1 | PREVCOP_04202 | PREVCOP_04201 | proline--tRNA ligase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro). | Hypothetical protein. | 0.613 |
proS | mtgA | PREVCOP_04202 | PREVCOP_04199 | proline--tRNA ligase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro). | Monofunctional biosynthetic peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family. | 0.574 |