STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB36326.1Hypothetical protein. (416 aa)    
Predicted Functional Partners:
EFB36327.1
Hypothetical protein; KEGG: pto:PTO0028 1.9e-33 5-methylcytosine-specific restriction enzyme B K07452; Psort location: Cytoplasmic, score: 8.96.
 
 
 0.962
EFB33915.1
Transposase, IS4 family; Psort location: Cytoplasmic, score: 8.96.
  
     0.664
EFB36788.1
Transposase, IS4 family; Psort location: Cytoplasmic, score: 8.96.
  
     0.663
EFB35876.1
Hypothetical protein; KEGG: eco:b4346 3.1e-35 mcrB, rglB; component of 5-methylcytosine-specific restriction enzyme McrBC K07452.
 
 
 0.658
EFB36055.1
KEGG: eco:b4346 2.0e-69 mcrB, rglB; component of 5-methylcytosine-specific restriction enzyme McrBC K07452; Psort location: Cytoplasmic, score: 8.96.
 
 
 0.654
EFB36030.1
Transposase, IS4 family; Psort location: Cytoplasmic, score: 8.96.
  
     0.640
EFB35105.1
Transposase, IS4 family; Psort location: Cytoplasmic, score: 8.96.
  
     0.640
EFB33802.1
Transposase, IS4 family; Psort location: Cytoplasmic, score: 8.96.
  
     0.640
EFB36727.1
Hypothetical protein; KEGG: eco:b4346 3.7e-31 mcrB, rglB; component of 5-methylcytosine-specific restriction enzyme McrBC K07452.
  
 
 0.609
EFB35704.1
Hypothetical protein; KEGG: hac:Hac_0362 2.8e-32 type II restriction enzyme K01157.
  
 
 0.599
Your Current Organism:
Prevotella copri
NCBI taxonomy Id: 537011
Other names: P. copri DSM 18205, Prevotella copri CB7, Prevotella copri DSM 18205, Prevotella copri JCM 13464, Prevotella copri str. DSM 18205, Prevotella copri strain DSM 18205
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.