STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB36198.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.96. (197 aa)    
Predicted Functional Partners:
EFB36197.1
Pyridoxal phosphate enzyme, YggS family; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.
       0.803
EFB36199.1
Aminotransferase, class I/II; KEGG: bfs:BF1601 7.7e-189 putative aspartate aminotransferase K00812.
       0.650
EFB36952.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.604
EFB36958.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.570
EFB36562.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.565
EFB36200.1
KEGG: pen:PSEEN3665 4.0e-08 efflux ABC transporter, ATP-binding/permease protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.549
EFB36414.1
Hypothetical protein.
  
     0.530
EFB35573.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
 
     0.509
EFB36017.1
Hypothetical protein; KEGG: fnu:FN0522 1.3e-09 exonuclease SBCC K03546; Psort location: Cytoplasmic, score: 8.96.
  
     0.469
EFB34130.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.463
Your Current Organism:
Prevotella copri
NCBI taxonomy Id: 537011
Other names: P. copri DSM 18205, Prevotella copri CB7, Prevotella copri DSM 18205, Prevotella copri JCM 13464, Prevotella copri str. DSM 18205, Prevotella copri strain DSM 18205
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.