STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB36200.1KEGG: pen:PSEEN3665 4.0e-08 efflux ABC transporter, ATP-binding/permease protein; Psort location: CytoplasmicMembrane, score: 10.00. (415 aa)    
Predicted Functional Partners:
EFB35261.1
KEGG: pen:PSEEN3042 2.3e-06 macB; macrolide ABC efflux protein MacB; Psort location: CytoplasmicMembrane, score: 9.46.
  
  
  0.967
lolD
ABC transporter, ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family.
 
 0.966
EFB35219.1
Putative bacteriocin export ABC transporter, lactococcin 972 group; KEGG: cch:Cag_0988 1.7e-51 ATPase K02003; Psort location: CytoplasmicMembrane, score: 7.88.
  
 0.801
EFB34996.1
ABC transporter, ATP-binding protein; KEGG: cch:Cag_0337 5.6e-51 ATPase K06020; Psort location: CytoplasmicMembrane, score: 7.88.
 
 0.774
EFB36236.1
ABC transporter, ATP-binding protein; KEGG: rru:Rru_A1291 2.7e-19 ABC transporter component K06021; Psort location: CytoplasmicMembrane, score: 7.88.
  
 0.749
EFB36414.1
Hypothetical protein.
 
 
 
 0.705
EFB36199.1
Aminotransferase, class I/II; KEGG: bfs:BF1601 7.7e-189 putative aspartate aminotransferase K00812.
       0.655
EFB36201.1
AMP-binding enzyme; KEGG: bth:BT2154 1.9e-121 putative long-chain-fatty-acid--CoA ligase K01897; Psort location: Cytoplasmic, score: 9.26.
       0.627
EFB35267.1
Outer membrane protein, OMP85 family; Psort location: OuterMembrane, score: 10.00.
  
   
 0.603
EFB36198.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.549
Your Current Organism:
Prevotella copri
NCBI taxonomy Id: 537011
Other names: P. copri DSM 18205, Prevotella copri CB7, Prevotella copri DSM 18205, Prevotella copri JCM 13464, Prevotella copri str. DSM 18205, Prevotella copri strain DSM 18205
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.