STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB36213.1Hypothetical protein. (272 aa)    
Predicted Functional Partners:
EFB34159.1
Hypothetical protein; KEGG: chu:CHU_0834 8.9e-07 CHU large protein K01238.
  
     0.684
glyA
Glycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.
       0.610
EFB34862.1
Hypothetical protein.
  
     0.567
EFB35642.1
Hypothetical protein.
  
     0.544
EFB34366.1
WD40-like protein.
  
     0.513
EFB36071.1
Hypothetical protein.
  
     0.511
EFB35449.1
Transcriptional regulator, AraC family; KEGG: bcz:BCZK2914 0.0034 adaA; methylphosphotriester-DNA alkyltransferase K00567; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.511
pyrI
Aspartate carbamoyltransferase, regulatory subunit; Involved in allosteric regulation of aspartate carbamoyltransferase.
 
     0.498
EFB35232.1
Hypothetical protein.
  
     0.490
EFB35850.1
Hypothetical protein.
  
     0.484
Your Current Organism:
Prevotella copri
NCBI taxonomy Id: 537011
Other names: P. copri DSM 18205, Prevotella copri CB7, Prevotella copri DSM 18205, Prevotella copri JCM 13464, Prevotella copri str. DSM 18205, Prevotella copri strain DSM 18205
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.