STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pflBKEGG: efa:EF1613 2.1e-264 pflB; formate acetyltransferase K00656; Psort location: Cytoplasmic, score: 9.26. (749 aa)    
Predicted Functional Partners:
pflA
Pyruvate formate-lyase 1-activating enzyme; Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine; Belongs to the organic radical-activating enzymes family.
  
 0.987
nifJ
Pyruvate synthase; KEGG: bfs:BF3168 0. nifJ; putative pyruvate-flavodoxin oxidoreductase K03737; Psort location: Cytoplasmic, score: 8.96.
    
 0.951
pta
KEGG: bth:BT3692 3.8e-116 phosphate acetyltransferase K00625.
   
 
 0.943
pyk
Pyruvate kinase; KEGG: bfr:BF4482 3.8e-148 pyruvate kinase K00873; Psort location: Cytoplasmic, score: 8.96.
   
 
 0.942
EFB34565.1
Phosphate acetyl/butyryl transferase; KEGG: bfs:BF3408 0. maeB; putative NADP-dependent malic enzyme K00029; Psort location: Cytoplasmic, score: 8.96.
   
 
 0.928
EFB34455.1
Lactate/malate dehydrogenase, NAD binding domain protein; KEGG: pgi:PG1949 2.3e-109 mdh; malate dehydrogenase K00026; Psort location: Cytoplasmic, score: 9.26; Belongs to the LDH/MDH superfamily.
   
 
 0.910
EFB36137.1
HMGL-like protein; KEGG: bth:BT1697 8.5e-174 pyruvate carboxylase subunit B K01960; Psort location: CytoplasmicMembrane, score: 9.96.
     
 0.886
EFB34908.1
Thiamine pyrophosphate enzyme, C-terminal TPP binding domain protein; KEGG: bth:BT0330 3.8e-107 vorA; ketoisovalerate oxidoreductase subunit vorA K00186.
     
 0.886
EFB34909.1
Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-binding domain protein; KEGG: bfr:BF1648 5.4e-140 vorB; ketoisovalerate oxidoreductase subunit VorB K00174.
     
 0.886
ilvB
Acetolactate synthase, large subunit, biosynthetic type; KEGG: bth:BT2077 2.4e-208 acetolactate synthase large subunit K01652.
     
 0.885
Your Current Organism:
Prevotella copri
NCBI taxonomy Id: 537011
Other names: P. copri DSM 18205, Prevotella copri CB7, Prevotella copri DSM 18205, Prevotella copri JCM 13464, Prevotella copri str. DSM 18205, Prevotella copri strain DSM 18205
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