STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB36255.1Putative toxin-antitoxin system, antitoxin component; KEGG: mma:MM2607 4.5e-10 nucleotidyltransferase; Psort location: Cytoplasmic, score: 8.96. (121 aa)    
Predicted Functional Partners:
EFB36254.1
Nucleotidyltransferase domain protein; KEGG: mma:MM2609 2.2e-10 nucleotidyltransferase.
 
    0.951
EFB34304.1
Putative toxin-antitoxin system, antitoxin component; KEGG: mma:MM2607 1.4e-13 nucleotidyltransferase; Psort location: Cytoplasmic, score: 8.96.
  
  
  0.849
EFB36806.1
Putative toxin-antitoxin system, antitoxin component; KEGG: tth:TTC1284 9.0e-12 nucleotidyltransferase; Psort location: Cytoplasmic, score: 8.96.
  
  
  0.848
EFB35716.1
Nucleotidyltransferase domain protein; KEGG: mma:MM2609 8.1e-11 nucleotidyltransferase; Psort location: Cytoplasmic, score: 8.96.
 
    0.794
EFB33889.1
Nucleotidyltransferase domain protein; KEGG: mma:MM1920 4.5e-10 nucleotidyltransferase.
  
    0.775
EFB34305.1
Nucleotidyltransferase domain protein; KEGG: mma:MM1920 1.5e-09 nucleotidyltransferase; Psort location: Cytoplasmic, score: 8.96.
  
    0.687
EFB36807.1
Nucleotidyltransferase domain protein; KEGG: mac:MA0766 5.1e-09 nucleotidyltransferase.
  
    0.558
EFB33890.1
Putative toxin-antitoxin system, antitoxin component; KEGG: tth:TTC1284 2.2e-17 nucleotidyltransferase; Psort location: Cytoplasmic, score: 8.96.
  
  
 
0.486
yidC
Membrane protein insertase, YidC/Oxa1 family domain protein; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins.
       0.419
Your Current Organism:
Prevotella copri
NCBI taxonomy Id: 537011
Other names: P. copri DSM 18205, Prevotella copri CB7, Prevotella copri DSM 18205, Prevotella copri JCM 13464, Prevotella copri str. DSM 18205, Prevotella copri strain DSM 18205
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