STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB36172.1Amino acid/peptide transporter; Psort location: CytoplasmicMembrane, score: 10.00. (508 aa)    
Predicted Functional Partners:
EFB35361.1
Peptidase, S9A/B/C family, catalytic domain protein; KEGG: ccr:CC2154 3.3e-85 dipeptidyl peptidase IV K01278; Psort location: Periplasmic, score: 9.44.
 
    0.564
EFB35851.1
Peptidase, S9A/B/C family, catalytic domain protein; KEGG: bth:BT4193 3.1e-192 dipeptidyl peptidase IV K01278.
 
    0.545
EFB36343.1
Peptidase family M13; KEGG: bfr:BF4102 3.7e-180 putative endothelin-converting enzyme K07386; Psort location: Cytoplasmic, score: 9.26.
  
   
 0.431
EFB36173.1
Sigma-70 region 2; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
  
    0.425
EFB35492.1
MFS transporter, SP family; KEGG: cal:orf19.3668 9.0e-44 HGT2; hexose transporter K01804; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
  
 
 0.422
EFB36175.1
Transporter, major facilitator family protein; KEGG: tpe:Tpen_1087 0.0016 proton-translocating NADH-quinone oxidoreductase, chain L; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.421
EFB36568.1
Peptidase family M13; KEGG: bfr:BF4102 2.6e-188 putative endothelin-converting enzyme K07386; Psort location: Cytoplasmic, score: 9.26.
  
   
 0.410
Your Current Organism:
Prevotella copri
NCBI taxonomy Id: 537011
Other names: P. copri DSM 18205, Prevotella copri CB7, Prevotella copri DSM 18205, Prevotella copri JCM 13464, Prevotella copri str. DSM 18205, Prevotella copri strain DSM 18205
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