STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB36175.1Transporter, major facilitator family protein; KEGG: tpe:Tpen_1087 0.0016 proton-translocating NADH-quinone oxidoreductase, chain L; Psort location: CytoplasmicMembrane, score: 10.00. (458 aa)    
Predicted Functional Partners:
gltA
KEGG: bth:BT4310 0. NADPH-dependent glutamate synthase small chain K00266; Psort location: Cytoplasmic, score: 9.97.
     
 0.665
EFB34154.1
Hypothetical protein.
 
     0.656
EFB33671.1
Pyridine nucleotide-disulfide oxidoreductase; KEGG: bce:BC0791 5.7e-145 NADH dehydrogenase K00359; Psort location: Cytoplasmic, score: 9.26; Belongs to the sulfur carrier protein TusA family.
  
 
 0.603
EFB36417.1
Peptidase, C69 family; KEGG: ljo:LJ1518 1.5e-25 dipeptidase K08659.
  
     0.594
EFB33725.1
Starch synthase; KEGG: sat:SYN_00879 8.9e-96 glycogen synthase/glycogen phosphorylase K00688:K00693.
  
    0.585
EFB36176.1
Hypothetical protein.
       0.581
EFB36259.1
Peptidase, S9A/B/C family, catalytic domain protein; KEGG: mxa:MXAN_6601 1.0e-90 peptidase, S9C (acylaminoacyl-peptidase) subfamily K01423.
 
     0.551
EFB34395.1
Hypothetical protein.
 
     0.544
EFB35924.1
acyl-CoA dehydrogenase, C-terminal domain protein; KEGG: bth:BT1806 7.5e-214 acyl-CoA dehydrogenase K00257; Psort location: Cytoplasmic, score: 8.96.
 
  
 0.532
EFB36174.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.501
Your Current Organism:
Prevotella copri
NCBI taxonomy Id: 537011
Other names: P. copri DSM 18205, Prevotella copri CB7, Prevotella copri DSM 18205, Prevotella copri JCM 13464, Prevotella copri str. DSM 18205, Prevotella copri strain DSM 18205
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.