STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB35913.1Mg2+ transporter-C family protein; KEGG: eci:UTI89_C4039 2.2e-31 yhiD; hypothetical protein YhiD K07507; Psort location: CytoplasmicMembrane, score: 9.46. (217 aa)    
Predicted Functional Partners:
EFB36142.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.695
EFB35911.1
Hypothetical protein.
       0.658
EFB34743.1
Calcium-translocating P-type ATPase, PMCA-type; KEGG: bfs:BF4149 1.7e-241 putative transmembrane calcium-transporting ATPase K01537; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.638
EFB33975.1
Calcium-translocating P-type ATPase, PMCA-type; KEGG: bfs:BF4149 7.2e-248 putative transmembrane calcium-transporting ATPase K01537; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.638
EFB34393.1
Transcriptional regulator, LuxR family; Psort location: CytoplasmicMembrane, score: 9.46.
   
  
 0.526
EFB35912.1
ATP-binding cassette protein, ChvD family; KEGG: noc:Noc_1687 1.3e-168 ABC transporter, ATPase subunit K06022; Psort location: CytoplasmicMembrane, score: 9.82.
       0.493
ftsH
Putative flagellar protein FliS; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family.
    
 
 0.455
atpB
ATP synthase F0, A subunit; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family.
    
 
 0.451
Your Current Organism:
Prevotella copri
NCBI taxonomy Id: 537011
Other names: P. copri DSM 18205, Prevotella copri CB7, Prevotella copri DSM 18205, Prevotella copri JCM 13464, Prevotella copri str. DSM 18205, Prevotella copri strain DSM 18205
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