STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB35953.1DNA (cytosine-5-)-methyltransferase; KEGG: cgb:cg1028 2.6e-53 putative restriction-modification system: methylase K00571; Psort location: Cytoplasmic, score: 8.96. (818 aa)    
Predicted Functional Partners:
EFB35954.1
Type III restriction enzyme, res subunit; KEGG: ehi:213.t00003 0.0048 hypothetical protein K01153; Psort location: Cytoplasmic, score: 8.96.
 
     0.944
EFB35817.1
KEGG: bbr:BB0913 1.9e-254 type III restriction enzyme K01156.
 
  
 0.815
EFB35816.1
Helicase C-terminal domain protein; KEGG: afu:AF2350 1.6e-09 ATP-dependent RNA helicase HepA, putative.
 
     0.758
EFB35815.1
Hypothetical protein.
 
     0.746
EFB34902.1
KEGG: hpa:HPAG1_1394 2.7e-08 type III R-M system restriction enzyme K01156; Psort location: Cytoplasmic, score: 8.96.
 
     0.742
EFB36507.1
Peptidase S24-like protein; KEGG: tcx:Tcr_1234 1.6e-05 putative prophage repressor K01356; Belongs to the peptidase S24 family.
 
     0.712
EFB36803.1
SNF2 family N-terminal domain protein; KEGG: afu:AF2350 7.0e-31 ATP-dependent RNA helicase HepA, putative; Psort location: Cytoplasmic, score: 8.96.
  
     0.606
EFB35939.1
Hypothetical protein; KEGG: mma:MM0193 1.4e-11 type III restriction-modification system methylation subunit K00571; Psort location: Cytoplasmic, score: 8.96.
  
     0.493
EFB36805.1
Hypothetical protein; KEGG: lsl:LSL_1759 0.00024 type III restriction-modification system restriction subunit K01156.
 
     0.462
Your Current Organism:
Prevotella copri
NCBI taxonomy Id: 537011
Other names: P. copri DSM 18205, Prevotella copri CB7, Prevotella copri DSM 18205, Prevotella copri JCM 13464, Prevotella copri str. DSM 18205, Prevotella copri strain DSM 18205
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.