STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB35959.1MBOAT family protein; KEGG: fal:FRAAL6221 1.3e-75 putative poly(beta-D-mannuronate) O-acetylase (alginate biosynthesis protein AlgI) K00680; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the membrane-bound acyltransferase family. (497 aa)    
Predicted Functional Partners:
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 
 0.904
EFB35958.1
Hypothetical protein.
  
    0.652
EFB35960.1
Antioxidant, AhpC/TSA family; KEGG: cta:CTA_0850 3.9e-08 protein disulfide isomerase K01829.
       0.592
EFB35957.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.513
EFB34518.1
AMP-binding enzyme; KEGG: lla:L91510 3.7e-47 dltA; D-alanine activating enzyme K03367; Psort location: Cytoplasmic, score: 9.26.
 
     0.487
EFB36907.1
KEGG: gka:GK3304 5.3e-126 mannose-6-phosphate isomerase (phosphomannose isomerase); mannose-1-phosphate guanylyl transferase (GDP-mannose pyrophosphorylase) K00971:K01809.
  
  
 0.467
Your Current Organism:
Prevotella copri
NCBI taxonomy Id: 537011
Other names: P. copri DSM 18205, Prevotella copri CB7, Prevotella copri DSM 18205, Prevotella copri JCM 13464, Prevotella copri str. DSM 18205, Prevotella copri strain DSM 18205
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.