STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pepD-2Xaa-His dipeptidase; KEGG: bth:BT4045 1.8e-155 aminoacyl-histidine dipeptidase K01270; Psort location: Cytoplasmic, score: 8.96. (487 aa)    
Predicted Functional Partners:
EFB36199.1
Aminotransferase, class I/II; KEGG: bfs:BF1601 7.7e-189 putative aspartate aminotransferase K00812.
  
 
  0.899
glyA
Glycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.
   
 
 0.892
pepD
Xaa-His dipeptidase; KEGG: bth:BT1615 4.3e-131 aminoacyl-histidine dipeptidase K01270; Psort location: Cytoplasmic, score: 8.96.
  
  
 
0.891
EFB34067.1
Aminotransferase, class I/II; KEGG: bfr:BF0595 9.4e-168 aspartate aminotransferase K00812.
    
  0.886
EFB34457.1
Aminotransferase, class I/II; KEGG: bth:BT1398 7.1e-131 putative aminotransferase B K00842; Psort location: Cytoplasmic, score: 8.96.
    
  0.873
EFB36021.1
Hypothetical protein; KEGG: hwa:HQ1489A 1.8e-05 dpg; probable dolichyl-phosphate beta-glucosyltransferase (only N-terminal homology) K00729; Psort location: CytoplasmicMembrane, score: 10.00.
       0.662
EFB34454.1
Creatinase; KEGG: bfs:BF4027 5.8e-152 putative peptidase K01262; Psort location: Cytoplasmic, score: 8.96; Belongs to the peptidase M24B family.
  
 
 0.546
ksgA
Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.
       0.518
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
    
 
 0.479
EFB35768.1
Peptidase, M24 family; KEGG: bfr:BF4360 9.2e-106 Xaa-Pro aminopeptidase K01262; Psort location: Cytoplasmic, score: 8.96.
   
 
 0.435
Your Current Organism:
Prevotella copri
NCBI taxonomy Id: 537011
Other names: P. copri DSM 18205, Prevotella copri CB7, Prevotella copri DSM 18205, Prevotella copri JCM 13464, Prevotella copri str. DSM 18205, Prevotella copri strain DSM 18205
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.