STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB36021.1Hypothetical protein; KEGG: hwa:HQ1489A 1.8e-05 dpg; probable dolichyl-phosphate beta-glucosyltransferase (only N-terminal homology) K00729; Psort location: CytoplasmicMembrane, score: 10.00. (330 aa)    
Predicted Functional Partners:
EFB34972.1
Hypothetical protein.
  
 
  0.707
EFB34928.1
Hypothetical protein.
  
     0.706
pepD-2
Xaa-His dipeptidase; KEGG: bth:BT4045 1.8e-155 aminoacyl-histidine dipeptidase K01270; Psort location: Cytoplasmic, score: 8.96.
       0.662
EFB35945.1
Hypothetical protein.
  
     0.637
ksgA
Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.
       0.621
EFB34978.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
    0.590
EFB34040.1
Hypothetical protein; Psort location: OuterMembrane, score: 9.49.
  
     0.550
EFB34140.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.548
EFB35323.1
Hypothetical protein; KEGG: aae:aq_2057 2.0e-21 helX; DNA helicase K01529; Psort location: Cytoplasmic, score: 8.96.
  
     0.544
EFB36112.1
Hypothetical protein.
  
     0.543
Your Current Organism:
Prevotella copri
NCBI taxonomy Id: 537011
Other names: P. copri DSM 18205, Prevotella copri CB7, Prevotella copri DSM 18205, Prevotella copri JCM 13464, Prevotella copri str. DSM 18205, Prevotella copri strain DSM 18205
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.