STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB36041.1TrkA C-terminal domain protein; KEGG: ecj:JW3469 4.0e-08 arsB; arsenite/antimonite transporter K03893; Psort location: CytoplasmicMembrane, score: 10.00. (620 aa)    
Predicted Functional Partners:
EFB33851.1
KEGG: shn:Shewana3_0031 2.1e-76 potassium uptake protein, TrkH family K00961; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.860
EFB34565.1
Phosphate acetyl/butyryl transferase; KEGG: bfs:BF3408 0. maeB; putative NADP-dependent malic enzyme K00029; Psort location: Cytoplasmic, score: 8.96.
  
  
 0.625
nifJ
Pyruvate synthase; KEGG: bfs:BF3168 0. nifJ; putative pyruvate-flavodoxin oxidoreductase K03737; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.619
EFB34202.1
Competence/damage-inducible domain protein CinA; Psort location: Cytoplasmic, score: 8.96; Belongs to the CinA family.
    
 0.603
EFB36040.1
Low molecular weight phosphotyrosine protein phosphatase; KEGG: ter:Tery_4026 4.4e-35 protein tyrosine phosphatase K01104; Psort location: Cytoplasmic, score: 8.96; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
  
  
 0.584
nadE
NAD+ synthase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
  
 
  0.574
EFB34743.1
Calcium-translocating P-type ATPase, PMCA-type; KEGG: bfs:BF4149 1.7e-241 putative transmembrane calcium-transporting ATPase K01537; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.574
EFB33975.1
Calcium-translocating P-type ATPase, PMCA-type; KEGG: bfs:BF4149 7.2e-248 putative transmembrane calcium-transporting ATPase K01537; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.574
EFB33671.1
Pyridine nucleotide-disulfide oxidoreductase; KEGG: bce:BC0791 5.7e-145 NADH dehydrogenase K00359; Psort location: Cytoplasmic, score: 9.26; Belongs to the sulfur carrier protein TusA family.
  
  
 0.561
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
  
  
 0.555
Your Current Organism:
Prevotella copri
NCBI taxonomy Id: 537011
Other names: P. copri DSM 18205, Prevotella copri CB7, Prevotella copri DSM 18205, Prevotella copri JCM 13464, Prevotella copri str. DSM 18205, Prevotella copri strain DSM 18205
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