STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB36069.1Ser/Thr phosphatase family protein; KEGG: ath:At1g14700 6.0e-31 F10B6.10; purple acid phosphatase, putative K01078. (357 aa)    
Predicted Functional Partners:
EFB36070.1
TonB-dependent receptor; KEGG: shn:Shewana3_2312 1.2e-12 1-(5-phosphoribosyl)-5- K01814; Psort location: OuterMembrane, score: 9.49.
 
     0.815
EFB36224.1
KEGG: ava:Ava_2150 2.8e-16 response regulator receiver signal transduction histidine kinase; Psort location: Cytoplasmic, score: 9.97.
    
 0.792
EFB36492.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: dvu:DVU2587 1.2e-13 sensor histidine kinase; Psort location: CytoplasmicMembrane, score: 9.46.
    
 0.772
EFB36071.1
Hypothetical protein.
 
     0.765
EFB35160.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: reh:H16_A0828 4.8e-41 cycS1; signal transduction histidine kinase containing a receiver domain (hybrid) and a PAS sensor domain; Psort location: CytoplasmicMembrane, score: 7.88.
  
 
 0.742
EFB34072.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: ava:Ava_2239 9.6e-62 adenylate/guanylate cyclase K01768; Psort location: CytoplasmicMembrane, score: 7.88.
 
  
 0.686
EFB34078.1
Transcriptional regulator, AraC family; KEGG: msm:MSMEG_3095 4.6e-11 D-ribose-binding periplasmic protein; Psort location: Periplasmic, score: 9.44.
    
 0.643
EFB36031.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: ana:all4963 1.1e-52 cyaC; adenylate cyclase carring two-component hybrid sensor and regulator domains; Psort location: CytoplasmicMembrane, score: 9.82.
    
 0.623
EFB35606.1
Transcriptional regulator, AraC family; KEGG: shn:Shewana3_3829 1.7e-21 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) K01745.
    
 0.623
EFB35435.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: ava:Ava_2239 6.6e-48 adenylate/guanylate cyclase K01768; Psort location: CytoplasmicMembrane, score: 9.82.
    
 0.623
Your Current Organism:
Prevotella copri
NCBI taxonomy Id: 537011
Other names: P. copri DSM 18205, Prevotella copri CB7, Prevotella copri DSM 18205, Prevotella copri JCM 13464, Prevotella copri str. DSM 18205, Prevotella copri strain DSM 18205
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