STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB36070.1TonB-dependent receptor; KEGG: shn:Shewana3_2312 1.2e-12 1-(5-phosphoribosyl)-5- K01814; Psort location: OuterMembrane, score: 9.49. (933 aa)    
Predicted Functional Partners:
EFB36071.1
Hypothetical protein.
 
     0.899
EFB36069.1
Ser/Thr phosphatase family protein; KEGG: ath:At1g14700 6.0e-31 F10B6.10; purple acid phosphatase, putative K01078.
 
     0.815
EFB34159.1
Hypothetical protein; KEGG: chu:CHU_0834 8.9e-07 CHU large protein K01238.
  
     0.747
EFB35449.1
Transcriptional regulator, AraC family; KEGG: bcz:BCZK2914 0.0034 adaA; methylphosphotriester-DNA alkyltransferase K00567; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.673
EFB35788.1
Hypothetical protein.
  
     0.652
EFB33995.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.631
EFB33927.1
DNA-binding helix-turn-helix protein; KEGG: eba:ebA5278 0.00033 bzdR; regulator of the anaerobic catobolism of benzoate BzdR K00891.
  
     0.585
EFB36789.1
TonB-linked outer membrane protein, SusC/RagA family; Psort location: OuterMembrane, score: 9.49.
  
     0.568
EFB35278.1
Hypothetical protein.
  
     0.553
EFB35547.1
TonB family domain protein; Psort location: Cytoplasmic, score: 8.96.
  
   0.552
Your Current Organism:
Prevotella copri
NCBI taxonomy Id: 537011
Other names: P. copri DSM 18205, Prevotella copri CB7, Prevotella copri DSM 18205, Prevotella copri JCM 13464, Prevotella copri str. DSM 18205, Prevotella copri strain DSM 18205
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.