STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pepTPeptidase T; Cleaves the N-terminal amino acid of tripeptides. Belongs to the peptidase M20B family. (407 aa)    
Predicted Functional Partners:
EFB36105.1
TrkA C-terminal domain protein; KEGG: ilo:IL2624 0.0045 atpE; F0F1-type ATP synthase, subunit c K02110; Psort location: CytoplasmicMembrane, score: 10.00.
  
    0.628
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
    
 
 0.479
asnA
KEGG: bth:BT2129 7.2e-138 aspartate--ammonia ligase K01914; Psort location: Cytoplasmic, score: 9.97.
       0.472
EFB35768.1
Peptidase, M24 family; KEGG: bfr:BF4360 9.2e-106 Xaa-Pro aminopeptidase K01262; Psort location: Cytoplasmic, score: 8.96.
   
 
 0.434
EFB34454.1
Creatinase; KEGG: bfs:BF4027 5.8e-152 putative peptidase K01262; Psort location: Cytoplasmic, score: 8.96; Belongs to the peptidase M24B family.
   
 
 0.434
glyA
Glycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.
   
 
 0.416
EFB35733.1
Dinuclear metal center protein, YbgI family; Psort location: Cytoplasmic, score: 8.96.
  
    0.403
Your Current Organism:
Prevotella copri
NCBI taxonomy Id: 537011
Other names: P. copri DSM 18205, Prevotella copri CB7, Prevotella copri DSM 18205, Prevotella copri JCM 13464, Prevotella copri str. DSM 18205, Prevotella copri strain DSM 18205
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