STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB36116.1Acyltransferase; KEGG: bfr:BF3148 9.5e-72 putative 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655; Psort location: Cytoplasmic, score: 8.96. (220 aa)    
Predicted Functional Partners:
cdsA
KEGG: bfr:BF0773 1.7e-79 phosphatidate cytidylyltransferase K00981; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the CDS family.
 
  
 0.953
EFB36076.1
NAD-dependent glycerol-3-phosphate dehydrogenase C-terminal domain protein; KEGG: bfs:BF3603 2.5e-135 putative phospholipids biosynthesis K00057; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
 
  
 0.901
EFB34037.1
Lipid kinase, YegS/Rv2252/BmrU family; KEGG: ana:all1876 3.3e-21 putative methylglyoxal synthase K01734; Psort location: Cytoplasmic, score: 8.96.
    
 0.804
EFB36117.1
KEGG: chu:CHU_1573 1.4e-70 lgtD; b-glycosyltransferase, glycosyltransferase family 2 protein K00754; Psort location: Cytoplasmic, score: 8.96.
       0.661
EFB36114.1
Vitamin B12 dependent methionine synthase, activation domain protein; KEGG: mca:MCA1545 3.8e-49 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase K00548; Psort location: Cytoplasmic, score: 8.96.
       0.623
EFB36115.1
Ser/Thr phosphatase family protein; KEGG: hpa:HPAG1_0403 2.8e-15 integral membrane protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.623
EFB36113.1
Amidohydrolase family protein; KEGG: bth:BT0250 2.4e-130 dihydroorotase (DHOase) K01465; Psort location: Cytoplasmic, score: 8.96.
  
    0.572
EFB36112.1
Hypothetical protein.
 
     0.570
mfd
Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily.
       0.570
EFB35160.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: reh:H16_A0828 4.8e-41 cycS1; signal transduction histidine kinase containing a receiver domain (hybrid) and a PAS sensor domain; Psort location: CytoplasmicMembrane, score: 7.88.
    
  0.518
Your Current Organism:
Prevotella copri
NCBI taxonomy Id: 537011
Other names: P. copri DSM 18205, Prevotella copri CB7, Prevotella copri DSM 18205, Prevotella copri JCM 13464, Prevotella copri str. DSM 18205, Prevotella copri strain DSM 18205
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