STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB36121.1KEGG: fnu:FN2007 3.4e-60 glutathione peroxidase K00432; Belongs to the glutathione peroxidase family. (184 aa)    
Predicted Functional Partners:
EFB36741.1
Hypothetical protein.
   
 0.557
EFB35312.1
Antioxidant, AhpC/TSA family; KEGG: mbo:Mb1506 0.00068 trxB1; probable thioredoxin TrxB1.
   
 0.557
EFB34402.1
Hypothetical protein.
   
 0.557
trxB
KEGG: pgi:PG1134 1.9e-112 trxB; thioredoxin reductase K00384; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.535
gap
Glyceraldehyde-3-phosphate dehydrogenase, type I; KEGG: bth:BT4263 1.7e-136 glyceraldehyde 3-phosphate dehydrogenase K00134; Psort location: Cytoplasmic, score: 9.97; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
   
 
 0.451
guaA
GMP synthase (glutamine-hydrolyzing) domain protein; Catalyzes the synthesis of GMP from XMP.
  
 
 0.444
EFB36122.1
Hypothetical protein.
       0.416
Your Current Organism:
Prevotella copri
NCBI taxonomy Id: 537011
Other names: P. copri DSM 18205, Prevotella copri CB7, Prevotella copri DSM 18205, Prevotella copri JCM 13464, Prevotella copri str. DSM 18205, Prevotella copri strain DSM 18205
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.