STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB36132.1Endonuclease/exonuclease/phosphatase family protein. (356 aa)    
Predicted Functional Partners:
udk
Uridine kinase; KEGG: bfs:BF3035 1.5e-66 udk; uridine kinase K00876; Psort location: Cytoplasmic, score: 8.96.
    
  0.846
EFB36133.1
Hypothetical protein; KEGG: reh:H16_A2653 0.0041 G:T/U mismatch-specific DNA glycosylase K01249.
       0.824
guaA
GMP synthase (glutamine-hydrolyzing) domain protein; Catalyzes the synthesis of GMP from XMP.
    
  0.699
EFB34147.1
Hypothetical protein.
  
     0.590
EFB35040.1
Hypothetical protein.
  
     0.554
EFB36131.1
Hypothetical protein.
       0.544
EFB36875.1
Tetratricopeptide repeat protein.
  
     0.499
EFB33659.1
KEGG: bfr:BF1494 2.8e-40 cytidine deaminase K01489.
 
  
  0.489
EFB35135.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.451
EFB36462.1
Phosphorylase family; KEGG: bfr:BF1175 2.9e-109 purine nucleoside phosphorylase II K00757; Psort location: Cytoplasmic, score: 8.96.
  
  
  0.448
Your Current Organism:
Prevotella copri
NCBI taxonomy Id: 537011
Other names: P. copri DSM 18205, Prevotella copri CB7, Prevotella copri DSM 18205, Prevotella copri JCM 13464, Prevotella copri str. DSM 18205, Prevotella copri strain DSM 18205
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.