STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB36156.1Cna protein B-type domain protein; KEGG: ddi:DDB0230105 1.4e-06 putative CLK family kinase K08287; Psort location: OuterMembrane, score: 9.49. (996 aa)    
Predicted Functional Partners:
EFB34962.1
Hypothetical protein.
  
     0.692
EFB35421.1
Hypothetical protein.
  
     0.687
EFB36689.1
Hypothetical protein.
  
     0.667
EFB36885.1
Hypothetical protein.
  
     0.665
EFB34795.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.656
aroB
3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ).
       0.647
EFB36176.1
Hypothetical protein.
  
     0.621
EFB34928.1
Hypothetical protein.
  
     0.609
EFB36579.1
Transporter, major facilitator family protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.607
EFB36305.1
Hypothetical protein.
  
     0.606
Your Current Organism:
Prevotella copri
NCBI taxonomy Id: 537011
Other names: P. copri DSM 18205, Prevotella copri CB7, Prevotella copri DSM 18205, Prevotella copri JCM 13464, Prevotella copri str. DSM 18205, Prevotella copri strain DSM 18205
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.