STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB35762.1Acyl-ACP thioesterase; KEGG: ctc:CTC00119 3.2e-16 acyl-acyl carrier protein thioesterase K01071; Psort location: Cytoplasmic, score: 8.96. (267 aa)    
Predicted Functional Partners:
ilvN
KEGG: bth:BT2076 1.3e-53 acetohydroxyacid synthase small subunit K01653; Psort location: Cytoplasmic, score: 8.96.
  
    0.708
ilvC
KEGG: bfs:BF3546 3.3e-149 putative reductoisomerase K00053.
     
 0.640
ilvB
Acetolactate synthase, large subunit, biosynthetic type; KEGG: bth:BT2077 2.4e-208 acetolactate synthase large subunit K01652.
  
    0.560
ilvD
KEGG: bfr:BF3763 8.1e-249 dihydroxy-acid dehydratase K01687; Psort location: Cytoplasmic, score: 8.96; Belongs to the IlvD/Edd family.
  
  
 0.557
EFB33822.1
Sodium bile acid symporter family protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.433
EFB35758.1
OmpA family protein; KEGG: bxe:Bxe_A4171 8.7e-07 putative cytochrome c oxidase K00403; Psort location: OuterMembrane, score: 10.00.
 
     0.408
Your Current Organism:
Prevotella copri
NCBI taxonomy Id: 537011
Other names: P. copri DSM 18205, Prevotella copri CB7, Prevotella copri DSM 18205, Prevotella copri JCM 13464, Prevotella copri str. DSM 18205, Prevotella copri strain DSM 18205
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.