STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB35778.1ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: bfs:BF3635 3.2e-158 rprX; two-component regulatory system, sensor kinase protein; Psort location: CytoplasmicMembrane, score: 9.82. (497 aa)    
Predicted Functional Partners:
rprY
Transcriptional regulatory protein RprY; KEGG: ava:Ava_1878 6.2e-36 two component transcriptional regulator, winged helix family K07659; Psort location: Cytoplasmic, score: 9.97.
  0.968
EFB36224.1
KEGG: ava:Ava_2150 2.8e-16 response regulator receiver signal transduction histidine kinase; Psort location: Cytoplasmic, score: 9.97.
 
 0.923
EFB36795.1
KEGG: rha:RHA1_ro05622 1.4e-29 response regulator (protein-glutamate methylesterase) K07669.
  0.903
EFB33874.1
Response regulator receiver domain protein; KEGG: ava:Ava_1878 8.1e-27 two component transcriptional regulator, winged helix family K07659; Psort location: Cytoplasmic, score: 9.97.
 
  0.891
EFB34667.1
Response regulator receiver domain protein; KEGG: eci:UTI89_C0420 9.9e-38 phoB; positive response regulator for pho regulon K07657; Psort location: Cytoplasmic, score: 9.97.
 
  0.856
EFB36125.1
Response regulator receiver domain protein; KEGG: shn:Shewana3_3829 7.4e-24 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) K01745; Psort location: Cytoplasmic, score: 9.26.
 
 0.855
EFB34072.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: ava:Ava_2239 9.6e-62 adenylate/guanylate cyclase K01768; Psort location: CytoplasmicMembrane, score: 7.88.
 
0.842
EFB36492.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: dvu:DVU2587 1.2e-13 sensor histidine kinase; Psort location: CytoplasmicMembrane, score: 9.46.
 
0.833
EFB34975.1
Response regulator receiver domain protein; KEGG: ava:Ava_1878 1.7e-26 two component transcriptional regulator, winged helix family K07659; Psort location: Cytoplasmic, score: 9.97.
  
  0.829
EFB34078.1
Transcriptional regulator, AraC family; KEGG: msm:MSMEG_3095 4.6e-11 D-ribose-binding periplasmic protein; Psort location: Periplasmic, score: 9.44.
 
 0.824
Your Current Organism:
Prevotella copri
NCBI taxonomy Id: 537011
Other names: P. copri DSM 18205, Prevotella copri CB7, Prevotella copri DSM 18205, Prevotella copri JCM 13464, Prevotella copri str. DSM 18205, Prevotella copri strain DSM 18205
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