STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rprYTranscriptional regulatory protein RprY; KEGG: ava:Ava_1878 6.2e-36 two component transcriptional regulator, winged helix family K07659; Psort location: Cytoplasmic, score: 9.97. (232 aa)    
Predicted Functional Partners:
EFB35160.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: reh:H16_A0828 4.8e-41 cycS1; signal transduction histidine kinase containing a receiver domain (hybrid) and a PAS sensor domain; Psort location: CytoplasmicMembrane, score: 7.88.
 0.977
EFB36492.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: dvu:DVU2587 1.2e-13 sensor histidine kinase; Psort location: CytoplasmicMembrane, score: 9.46.
  
 0.970
EFB35778.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: bfs:BF3635 3.2e-158 rprX; two-component regulatory system, sensor kinase protein; Psort location: CytoplasmicMembrane, score: 9.82.
  0.968
EFB36224.1
KEGG: ava:Ava_2150 2.8e-16 response regulator receiver signal transduction histidine kinase; Psort location: Cytoplasmic, score: 9.97.
 
 0.921
EFB36794.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: bfs:BF3635 1.6e-39 rprX; two-component regulatory system, sensor kinase protein; Psort location: CytoplasmicMembrane, score: 9.82.
  0.912
EFB34666.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: bfr:BF1575 2.2e-95 two-component system sensor histidine kinase K07636; Psort location: CytoplasmicMembrane, score: 9.82.
 
  0.871
EFB33875.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: bcz:BCZK4329 3.0e-25 phoR; phosphate regulon sensor protein K07636; Psort location: CytoplasmicMembrane, score: 10.00.
 
  0.868
EFB34973.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: gsu:GSU1101 1.8e-30 sensory box histidine kinase K07636; Psort location: CytoplasmicMembrane, score: 7.88.
 
  0.867
EFB36827.1
Respiratory-chain NADH dehydrogenase, 49 Kd subunit; KEGG: bth:BT4065 2.0e-149 NADH dehydrogenase I, chain D K00332:K00333; Psort location: Cytoplasmic, score: 8.96.
    
   0.811
EFB34072.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: ava:Ava_2239 9.6e-62 adenylate/guanylate cyclase K01768; Psort location: CytoplasmicMembrane, score: 7.88.
  
0.738
Your Current Organism:
Prevotella copri
NCBI taxonomy Id: 537011
Other names: P. copri DSM 18205, Prevotella copri CB7, Prevotella copri DSM 18205, Prevotella copri JCM 13464, Prevotella copri str. DSM 18205, Prevotella copri strain DSM 18205
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