STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB35806.1Class II glutamine amidotransferase; KEGG: chu:CHU_2612 4.4e-161 purF; amidophosphoribosyltransferase K00764. (627 aa)    
Predicted Functional Partners:
purL
Putative phosphoribosylformylglycinamidine synthase; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate.
 
 0.998
purD
KEGG: bth:BT3253 2.1e-163 phosphoribosylamine--glycine ligase K01945; Psort location: Cytoplasmic, score: 8.96; Belongs to the GARS family.
 0.997
carA
Carbamoyl-phosphate synthase, small subunit; KEGG: bfr:BF2636 1.5e-160 glutamine-hydrolyzing carbamoyl phosphate synthetase III K01956; Psort location: Cytoplasmic, score: 8.96; Belongs to the CarA family.
  
 
 0.975
carB
Carbamoyl-phosphate synthase, large subunit; KEGG: bfr:BF2635 0. carbamyl phosphate synthetase K01955; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.964
EFB36099.1
Hypothetical protein; KEGG: bfr:BF0911 1.7e-175 putative phosphoribosylformylglycinamidine cyclo-ligase K01933; Psort location: Cytoplasmic, score: 8.96.
 
 
 0.948
purC
KEGG: bfr:BF0918 2.6e-124 phosphoribosylamidoimidazole-succinocarboxamide synthase K01923; Psort location: Cytoplasmic, score: 8.96; Belongs to the SAICAR synthetase family.
 
 0.922
EFB34847.1
Class II glutamine amidotransferase; KEGG: bth:BT0553 0. glutamate synthase, large subunit K00265; Psort location: Cytoplasmic, score: 8.96.
    
 0.913
gltA
KEGG: bth:BT4310 0. NADPH-dependent glutamate synthase small chain K00266; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.896
prs
Ribose-phosphate diphosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.
  
 0.895
EFB35753.1
Putative glutamate synthase (NADPH), homotetrameric; KEGG: tte:TTE0693 2.2e-95 gltD2; NADPH-dependent glutamate synthase beta chain and related oxidoreductases K00266; Psort location: Cytoplasmic, score: 9.97.
     
 0.874
Your Current Organism:
Prevotella copri
NCBI taxonomy Id: 537011
Other names: P. copri DSM 18205, Prevotella copri CB7, Prevotella copri DSM 18205, Prevotella copri JCM 13464, Prevotella copri str. DSM 18205, Prevotella copri strain DSM 18205
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