STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB35824.1PHP domain protein; KEGG: vfi:VFA0065 7.4e-33 DNA polymerase beta K04477; Psort location: Cytoplasmic, score: 8.96. (240 aa)    
Predicted Functional Partners:
hisB
Histidinol-phosphatase; KEGG: bth:BT0203 1.3e-145 hisB; histidinol-phosphatase / imidazoleglycerol-phosphate dehydratase K01089:K01693; In the C-terminal section; belongs to the imidazoleglycerol-phosphate dehydratase family.
  
 
 0.815
hisE
phosphoribosyl-ATP diphosphatase; KEGG: bth:BT1377 9.6e-79 phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase K01496:K01523; Psort location: Cytoplasmic, score: 9.26; In the N-terminal section; belongs to the PRA-CH family.
  
 
 0.793
cah
Carbonate dehydratase; KEGG: cpr:CPR_0410 4.4e-51 carbonic anhydrase K01672; Psort location: Cytoplasmic, score: 8.96.
       0.658
hisD
Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.
  
 
 0.540
EFB35823.1
Hypothetical protein; Belongs to the UPF0246 family.
       0.519
hisC
KEGG: bfr:BF3188 8.2e-121 histidinol-phosphate aminotransferase K00817; Psort location: Cytoplasmic, score: 8.96; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.
  
 
 0.500
EFB34478.1
Phosphodiesterase family protein; KEGG: eci:UTI89_C2584 7.7e-38 yfcE; hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
 
     0.428
ybeY
Translation metalloprotein YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
   
    0.405
Your Current Organism:
Prevotella copri
NCBI taxonomy Id: 537011
Other names: P. copri DSM 18205, Prevotella copri CB7, Prevotella copri DSM 18205, Prevotella copri JCM 13464, Prevotella copri str. DSM 18205, Prevotella copri strain DSM 18205
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.