STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB35845.1Hypothetical protein. (78 aa)    
Predicted Functional Partners:
yqeV
tRNA methylthiotransferase YqeV; KEGG: bce:BC4308 2.6e-69 Fe-S oxidoreductase.
       0.768
EFB35848.1
KEGG: chu:CHU_2676 8.2e-82 b-glycosyltransferase, glycosyltransferase family 2 protein.
       0.599
EFB35843.1
Transporter, major facilitator family protein; KEGG: shn:Shewana3_1692 2.2e-14 Xaa-His dipeptidase K01270; Psort location: CytoplasmicMembrane, score: 10.00.
       0.511
EFB35844.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.511
EFB35847.1
Radical SAM protein, TIGR01212 family; KEGG: btk:BT9727_4481 2.3e-54 conserved hypothetical protein, possible Fe-S oxidoreductase; Psort location: Cytoplasmic, score: 8.96.
       0.440
Your Current Organism:
Prevotella copri
NCBI taxonomy Id: 537011
Other names: P. copri DSM 18205, Prevotella copri CB7, Prevotella copri DSM 18205, Prevotella copri JCM 13464, Prevotella copri str. DSM 18205, Prevotella copri strain DSM 18205
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.