STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB35851.1Peptidase, S9A/B/C family, catalytic domain protein; KEGG: bth:BT4193 3.1e-192 dipeptidyl peptidase IV K01278. (729 aa)    
Predicted Functional Partners:
EFB35850.1
Hypothetical protein.
       0.795
EFB34202.1
Competence/damage-inducible domain protein CinA; Psort location: Cytoplasmic, score: 8.96; Belongs to the CinA family.
  
 
  0.592
EFB34023.1
Hypothetical protein; Catalyzes the removal of dipeptides from the N-terminus of oligopeptides.
  
   
 0.560
EFB36172.1
Amino acid/peptide transporter; Psort location: CytoplasmicMembrane, score: 10.00.
 
    0.545
EFB35797.1
Hypothetical protein; KEGG: rno:24206 1.2e-05 Apeh; acylpeptide hydrolase K01303.
  
     0.545
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
    
  0.526
EFB33659.1
KEGG: bfr:BF1494 2.8e-40 cytidine deaminase K01489.
  
  
  0.420
EFB36232.1
Beta-lactamase; KEGG: rba:RB2098 3.3e-43 ndaD; D-aminoacylase.
  
     0.413
Your Current Organism:
Prevotella copri
NCBI taxonomy Id: 537011
Other names: P. copri DSM 18205, Prevotella copri CB7, Prevotella copri DSM 18205, Prevotella copri JCM 13464, Prevotella copri str. DSM 18205, Prevotella copri strain DSM 18205
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.