STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB35546.1LytTr DNA-binding domain protein. (122 aa)    
Predicted Functional Partners:
EFB35547.1
TonB family domain protein; Psort location: Cytoplasmic, score: 8.96.
       0.793
EFB35548.1
Tetratricopeptide repeat protein; KEGG: ava:Ava_1552 0.0010 serine/threonine protein kinase with TPR repeats K00908.
       0.772
EFB36031.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: ana:all4963 1.1e-52 cyaC; adenylate cyclase carring two-component hybrid sensor and regulator domains; Psort location: CytoplasmicMembrane, score: 9.82.
    
 0.770
EFB35606.1
Transcriptional regulator, AraC family; KEGG: shn:Shewana3_3829 1.7e-21 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) K01745.
    
 0.770
EFB35435.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: ava:Ava_2239 6.6e-48 adenylate/guanylate cyclase K01768; Psort location: CytoplasmicMembrane, score: 9.82.
    
 0.770
EFB34684.1
Transcriptional regulator, AraC family; KEGG: shn:Shewana3_3829 1.0e-30 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) K01745; Psort location: CytoplasmicMembrane, score: 9.46.
    
 0.770
EFB36125.1
Response regulator receiver domain protein; KEGG: shn:Shewana3_3829 7.4e-24 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) K01745; Psort location: Cytoplasmic, score: 9.26.
    
 0.700
EFB35673.1
Response regulator receiver domain protein; KEGG: ava:Ava_2239 4.6e-48 adenylate/guanylate cyclase K01768; Psort location: CytoplasmicMembrane, score: 9.82.
    
 0.693
EFB35344.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: ana:all4963 9.9e-52 cyaC; adenylate cyclase carring two-component hybrid sensor and regulator domains; Psort location: CytoplasmicMembrane, score: 9.82.
    
 0.693
EFB34375.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: ana:all4963 8.9e-55 cyaC; adenylate cyclase carring two-component hybrid sensor and regulator domains; Psort location: CytoplasmicMembrane, score: 9.82.
    
 0.693
Your Current Organism:
Prevotella copri
NCBI taxonomy Id: 537011
Other names: P. copri DSM 18205, Prevotella copri CB7, Prevotella copri DSM 18205, Prevotella copri JCM 13464, Prevotella copri str. DSM 18205, Prevotella copri strain DSM 18205
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