STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB35560.1Hypothetical protein; Psort location: OuterMembrane, score: 9.49. (759 aa)    
Predicted Functional Partners:
EFB35561.1
Hypothetical protein.
 
     0.775
EFB36756.1
Single-strand binding family protein.
  
     0.767
EFB35788.1
Hypothetical protein.
  
     0.740
EFB34076.1
Hypothetical protein; KEGG: bth:BT1765 9.2e-27 levanase precursor (2,6-beta-D-fructofuranosidase) K01238.
 
     0.731
EFB35690.1
Hypothetical protein.
  
     0.701
EFB34697.1
Hypothetical protein.
  
 
   0.695
EFB36349.1
Hypothetical protein.
  
     0.689
EFB35559.1
Alpha-galactosidase; KEGG: bfr:BF0287 1.3e-271 alpha-galactosidase K07407.
 
     0.663
EFB36145.1
Hypothetical protein; KEGG: bld:BLi01137 0.0084 rapG; response regulator aspartate phosphatase; RBL03074.
  
     0.644
EFB36071.1
Hypothetical protein.
  
     0.622
Your Current Organism:
Prevotella copri
NCBI taxonomy Id: 537011
Other names: P. copri DSM 18205, Prevotella copri CB7, Prevotella copri DSM 18205, Prevotella copri JCM 13464, Prevotella copri str. DSM 18205, Prevotella copri strain DSM 18205
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.