STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB35570.1Hypothetical protein. (113 aa)    
Predicted Functional Partners:
EFB36224.1
KEGG: ava:Ava_2150 2.8e-16 response regulator receiver signal transduction histidine kinase; Psort location: Cytoplasmic, score: 9.97.
     
 0.507
EFB35403.1
OmpA family protein; Psort location: OuterMembrane, score: 9.92.
  
  0.471
EFB36875.1
Tetratricopeptide repeat protein.
  
  
 0.470
EFB36597.1
Putative flagellar protein FliS.
   
  0.454
EFB36311.1
OmpA family protein; KEGG: bxe:Bxe_A4171 1.9e-07 putative cytochrome c oxidase K00403; Psort location: OuterMembrane, score: 9.92.
   
  0.454
EFB35758.1
OmpA family protein; KEGG: bxe:Bxe_A4171 8.7e-07 putative cytochrome c oxidase K00403; Psort location: OuterMembrane, score: 10.00.
   
  0.454
EFB34914.1
OmpA family protein; Psort location: OuterMembrane, score: 9.92.
   
  0.454
EFB34926.1
Putative phage prohead protease, HK97 family; KEGG: bxe:Bxe_A4171 4.2e-08 putative cytochrome c oxidase K00403; Psort location: OuterMembrane, score: 9.49.
   
  0.454
EFB34394.1
Hypothetical protein.
   
  0.454
EFB34395.1
Hypothetical protein.
   
  0.454
Your Current Organism:
Prevotella copri
NCBI taxonomy Id: 537011
Other names: P. copri DSM 18205, Prevotella copri CB7, Prevotella copri DSM 18205, Prevotella copri JCM 13464, Prevotella copri str. DSM 18205, Prevotella copri strain DSM 18205
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.